Healthy Freezer Breakfast Burritos {easy and ready for breakfast in 20 minutes! }

These healthy frozen breakfast burritos are ready in about 20 minutes and stock your freezer with a protein-packed, veggie-packed breakfast for less than $1 each. It’s an easy way to skip the drive-thru and start off your busy mornings with homemade food.
270 calories 33 grams of carbohydrates 13 grams fat 27 grams of protein 4
Healthy Freezer Breakfast Burritos Recipe
On a chaotic morning, there’s nothing better than pulling a homemade breakfast burrito out of the refrigerator, popping it in the microwave, and knowing you’re eating real food and not a mysterious drive-thru package. These frozen burritos are stuffed with scrambled eggs, black beans, peppers, onions, and enough cheese to feel satisfying.
I like to make a big batch on Sunday, so breakfast is basically a week (or more) away. They’re filling, perfect for freezing, and easily customized with any veggies or proteins you already have in the freezer. Plus, they reheat in just minutes, so you can have a hot, protein-packed breakfast even when you’re rushing out the door.
You can keep the base simple, like in the recipe below, or make a little “burrito bar” at home with different fillings. Either way, once you have your freezer stash, you’ll wonder why you spent restaurant money on a breakfast burrito.

before starting
Before you start rolling, there are a few things worth knowing so that your burritos freeze and reheat well.
- Choose a sturdy tortilla: Use soft burrito-sized flour or low-carb tortillas because they wrap and freeze better than smaller or very thin tortillas. Warm them before filling so they don’t crack when rolled.
- Drain the beans: Make sure the black beans are rinsed and drained so excess liquid doesn’t cause the burritos to become soggy after freezing.
- Cool filling completely: Allow the egg, bean and vegetable mixture to cool to room temperature before wrapping. Filling your burritos while everything is steaming hot is the fastest way to have soggy tortillas later.
- Use cheese as a barrier: Sprinkle a little cheese directly onto the tortilla before adding the filling. It will melt into a thin layer that will help protect the tortillas from sogginess when freezing and reheating.
How to Make Healthy Freezer Breakfast Burritos
Here’s a quick overview of how to put these breakfast burritos together from start to finish.
1. Boil vegetables
Heat olive oil in a skillet over medium heat. Add the sliced peppers and red onion and cook, stirring occasionally, until they soften and begin to caramelize.
2. Heat the beans
Stir the drained black beans into the vegetable mixture and let them heat through for a minute or two so everything is thoroughly mixed and seasoned.
3. Scrambled eggs
Whisk the eggs with salt and pepper and add them to the pan with the vegetables and beans. Fry gently until eggs are just cooked but still soft.
4. Warm tortillas
Soften the tortillas in the microwave or oven to make them pliable. This makes them easier to roll without tearing.
5. Fill, roll and freeze
Arrange each tortilla, sprinkle with some cheese, and add a portion of the egg mixture. Roll into a burrito and tuck into the sides as you go. Eat whatever you want immediately, then let the rest cool completely before wrapping and freezing it individually.
Recipe Tips and Tricks
Here are the best tips and pro tips for helping these frozen breakfast burritos come out perfect every time.
- Set up the assembly line: Line the warm tortillas, cheese and cooled egg filling and make all the burritos at once. This is the fastest way to make a large batch and allows you to easily adjust the filling from one burrito to the next.
- Add meat if you like: Toss cooked turkey bacon, turkey sausage, lean ham or leftover roast chicken with beans and vegetables. Make sure all meats are fully cooked and cool before assembling and freezing.
- Try different vegetables: Peppers and onions are classic, but you can add cooked spinach, shredded zucchini, diced broccoli, cauliflower rice or drained diced tomatoes. Boil off the excess moisture first.
- Season the eggs well: If the eggs are underseasoned, they will taste bland. Taste the vegetable-bean mixture before adding the eggs, and adjust the amount of salt and pepper to make the entire filling flavorful.
- Skip the salsa in the filling: Salsa adds flavor but will make the tortillas become soggy in the refrigerator. Instead, leave the salsa on the side or add it after reheating.
- Make a quick burrito: If you’re not prepping in batches, you can scramble an egg in the microwave and make a fresh burrito using the same filling combination.
- Add additional vegetables: This is the perfect place to eat leftover roasted vegetables, sautéed spinach, mushrooms or zucchini. Just avoid using watery vegetables that aren’t cooked yet, as they will release liquid and soften the tortilla.
- Skip the salsa inside the burrito: The salsa is delicious, but it adds extra moisture. For frozen burritos, set the salsa aside and add it after reheating so the tortillas stay nice and firm.

Service concept
Here are some easy and delicious ways to serve these breakfast burritos.
- Serve with salsa or hot sauce: Serve with your favorite red or green salsa, pico de gallo, or hot sauce for extra flavor.
- Add fresh ingredients: Once reheated, add sliced avocado or guacamole, chopped cilantro, or a spoonful of Greek yogurt or light sour cream.
- Pair with fruit: Complete the meal with a bowl of berries, sliced melon, or apple slices for a refreshing, sweet contrast.
Store and reheat
Here’s how to store, reheat, and enjoy breakfast burrito leftovers.
- Store in the refrigerator: If you plan to eat within 2-3 days, wrap the cooled burritos tightly in plastic wrap or foil and store in an airtight container in the refrigerator.
- Freeze for later use: For extended storage, wrap each cooled burrito in plastic wrap or parchment paper, then foil and freeze in a freezer bag for up to 3-4 months.
- Reheat gently: For best freezing results, unwrap the burrito and wrap it in slightly damp paper towels and heat in the microwave for 2-3 minutes, flipping halfway through. For extra crispiness, toast in a dry skillet or oven for a few minutes.
- Use up leftovers: Cut reheated burritos into bite-sized pieces for a high-protein snack, turn them into burrito bowls with veggies or rice, or chop them up and sauté them into a quick skillet chowder with extra veggies.
FAQ
Here are some of the most frequently asked questions about this recipe:
Can I make these breakfast burritos healthier or lighter?
Absolutely. Use egg whites in place of some of the eggs, add extra veggies, choose high-fiber or low-carb tortillas, and stick to moderate amounts of low-fat cheese. You can still have a hearty, satisfying breakfast without eating too much.
Can I make these burritos dairy free?
Yes. Just omit the cheese or use your favorite dairy-free shredded cheese. You can add extra beans or vegetables to keep the burrito full and flavorful.
Can I make these gluten free?
You can substitute your favorite gluten-free tortillas. Warm them well before rolling as some gluten-free varieties are more fragile and may crack if cold.
How to prevent tortillas from tearing when rolling them?
Make sure the tortillas are warm and pliable before filling them, don’t overfill them, and tuck the sides in tightly as you roll. If your tortillas are very dry, you can help soften them by wrapping them in a damp paper towel and quickly heating them in the microwave for 10-15 seconds.
Can I add avocado before freezing?
It’s best not to put avocado in burritos before freezing. Avocados brown easily, become mushy, and don’t reheat well. Add fresh avocado or guacamole after reheating for best flavor and texture.



